PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV85792.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB_related

Protein Properties

Length: 592aa MW: 65042.4 Da PI: 9.053

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV85792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33	1.4e-10	161	202	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a +q+G W+ I g ++t+ q++s+ qk+ RWV85792.1 161 RERWTEEEHNKFLEALQQYGRA-WRCIE---G-TKTAVQIRSHAQKF 202 78*****************88.8865...5.99**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MSPFPHIWRK ISVHFDLRGV VSGHDRLRSD PSTLLLDDPE VDPWDCSGSG ALLLLTFFRQ 60 SKSQSKCNVP IALPATRCQV FCRPVDPSHL FCRVASALPR RTRSAMPSGA LLHRVLSVVR 120 CVADRSEPEV SRWTLPRFGR HPTYVRLGDA VRKPYTITKQ RERWTEEEHN KFLEALQQYG 180 RAWRCIEGTK TAVQIRSHAQ KFFSKVVRES GSNNDNTGAS KGIEIPPPRP KRKPVHPYPR 240 KLGHSSNKEI PALKQLERRP LRSPIICEQD NRSPTSVLSA VGSETMGSVF SIGQNGCSSP 300 VSSAAGSNDQ DDRGQSPIMT VQEEHKLQGF DPAVPASTTQ DQPPEVRDQC PNAYTSSKAP 360 LPTLKLFGKM VVVTDSNVSS ASSAANVAQP QLTSSIDIKD LRENKALNLL SKAETWLQRP 420 RHGVFTGDSI RSACDVYPGR TPPLFYRCPL VGGHSVKPTF LSPPWWSMNG NLPFSYIHLQ 480 PQYPLQFGME AAGNEDMQRE GSWTGSDTAS TSGAGLTDPN AVVVNSNKAE NVAESDSMPC 540 ASLKPSSILA SVRSGGFGRG FVPYNRCAVE SEVQQSVTAS EDGESQALRL YL

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MSPFPHIWRK ISVHFDLRGV VSGHDRLRSD PSTLLLDDPE VDPWDCSGSG ALLLLTFFRQ  60
SKSQSKCNVP IALPATRCQV FCRPVDPSHL FCRVASALPR RTRSAMPSGA LLHRVLSVVR  120
CVADRSEPEV SRWTLPRFGR HPTYVRLGDA VRKPYTITKQ RERWTEEEHN KFLEALQQYG  180
RAWRCIEGTK TAVQIRSHAQ KFFSKVVRES GSNNDNTGAS KGIEIPPPRP KRKPVHPYPR  240
KLGHSSNKEI PALKQLERRP LRSPIICEQD NRSPTSVLSA VGSETMGSVF SIGQNGCSSP  300
VSSAAGSNDQ DDRGQSPIMT VQEEHKLQGF DPAVPASTTQ DQPPEVRDQC PNAYTSSKAP  360
LPTLKLFGKM VVVTDSNVSS ASSAANVAQP QLTSSIDIKD LRENKALNLL SKAETWLQRP  420
RHGVFTGDSI RSACDVYPGR TPPLFYRCPL VGGHSVKPTF LSPPWWSMNG NLPFSYIHLQ  480
PQYPLQFGME AAGNEDMQRE GSWTGSDTAS TSGAGLTDPN AVVVNSNKAE NVAESDSMPC  540
ASLKPSSILA SVRSGGFGRG FVPYNRCAVE SEVQQSVTAS EDGESQALRL YL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37260.1	9e-35	MYB_related family protein