PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV85706.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 408aa MW: 43020.6 Da PI: 4.7362

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV85706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.8	7.1e-07	372	396	7	30
HHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 7 erErrRRdriNsafeeLrellPk.a 30 ++ErrRR+++N+++ Lr+++Pk + RWV85706.1 372 MAERRRRKKLNDRLYMLRSVVPKiS 396 79********************944 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MLSGINGVVW TEGGGDEDDA ASWTRANASN ASDGVMGERR DELGLPIFKS MLDDDDDDDW 60 YLGSVAASNP VPPAASHHSF QAFQTHQELT DVAFPSNVSP HEALMLPSVV NLDQNQPFFP 120 AKSALSSLFV SVCSNPFDTG FGVGYDAPGF LQASQGSNFP VMMNRGCGGE GVLGFAGMGA 180 GEQLACPDLS SGAEFSGDHL LPSSGHCSGS SSGAAFGPMG FDGFESNSFL NRSKVLRPLE 240 IFPPVGAQPT LFQKRAAAAL RQNSSVSGEK GGFLGLWEWE GVVPGNRGKT ELEDESNKKR 300 KGSEEDEMDD GSIDASGLNY DTDDAAAENV KGEENANGGG GCGGSNSYAN STVTGGGGHK 360 GKKKGLPAKN LMAERRRRKK LNDRLYMLRS VVPKISKVKT CILHFFTV

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MLSGINGVVW TEGGGDEDDA ASWTRANASN ASDGVMGERR DELGLPIFKS MLDDDDDDDW  60
YLGSVAASNP VPPAASHHSF QAFQTHQELT DVAFPSNVSP HEALMLPSVV NLDQNQPFFP  120
AKSALSSLFV SVCSNPFDTG FGVGYDAPGF LQASQGSNFP VMMNRGCGGE GVLGFAGMGA  180
GEQLACPDLS SGAEFSGDHL LPSSGHCSGS SSGAAFGPMG FDGFESNSFL NRSKVLRPLE  240
IFPPVGAQPT LFQKRAAAAL RQNSSVSGEK GGFLGLWEWE GVVPGNRGKT ELEDESNKKR  300
KGSEEDEMDD GSIDASGLNY DTDDAAAENV KGEENANGGG GCGGSNSYAN STVTGGGGHK  360
GKKKGLPAKN LMAERRRRKK LNDRLYMLRS VVPKISKVKT CILHFFTV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	362	380	KKKGLPAKNLMAERRRRKK
2	374	381	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	2e-30	bHLH family protein