PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV85603.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 694aa MW: 75577.5 Da PI: 9.7369

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV85603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.9	3.2e-29	106	190	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r+e++ ++r++ k+plWeev +k+ e g++rs+k+Ckek+en++k+yk++keg+ +r++++s +++f+qlea RWV85603.1 106 RWPRQETLALLKIRSELDAAFRDATFKGPLWEEVCRKLGELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YRFFSQLEA 190 8*******************************************************************866665..*****85 PP
2	trihelix	104.5	7.9e-33	490	575	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+e+e++++++ k++lWee+s+ +++ g++rs+k+Ckekwen+nk++kk+ke++kkr e+s+tcpyf+ql+a RWV85603.1 490 RWPKAEVHALINLRSELESKYQEAGPKGTLWEEISAGIQRLGYNRSAKRCKEKWENINKYFKKVKESNKKR-LEDSKTCPYFHQLDA 575 8*******************************************************************8.67888******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
RRESIFKDMQ QQKAGSQFVV PHSEMAPFSP SAVGSGAHFL GIPGPDPLQQ PPMTEAASPI 60 SSRTPARPPT VDFDELAPAG VGNCLDHQAL AGGEDAERGG GATGNRWPRQ ETLALLKIRS 120 ELDAAFRDAT FKGPLWEEVC RKLGELGYKR SAKKCKEKFE NVHKYYKRTK EGRAGRQDGK 180 SYRFFSQLEA LYSGSSDGGA TTSTANPAPA PHLVAASSAF SAGMAGPPVS RPQPISAAAP 240 PTMATPTRVA VPDLALPGGL QGLTSSAAAG ITFSWNSYSS SSSSDSDGEE TGDAGENQEG 300 RKRKHGGGSG ASRKMMAFFG RLMNQVMERQ DAMQQRFLEV IEKRDQDRMI RDEAWRRQEM 360 ERLNHEQELL AQERVMAASR DTAIISYLQK ISGQTAAVPP MLATPISIAP LSPQQPFQHP 420 HERSQPPRQQ QQTPRAPAQS PQNRNEFKQH HKSNEVVRHK SSSASEIDPT LEPQEAVGSG 480 SLEPLPSSSR WPKAEVHALI NLRSELESKY QEAGPKGTLW EEISAGIQRL GYNRSAKRCK 540 EKWENINKYF KKVKESNKKR LEDSKTCPYF HQLDAIYRKK LLSSGGTSGG SGNIVGIQGQ 600 QVQEANPPPN QQKSDAVTVM PQEQAPPPPQ QQAGSKHGKH RNSNNQNDGN SEGGEVSLGI 660 QVPTSNGGLP PRFFGEGLNK VTTSPLLPPL KIYP

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

RRESIFKDMQ QQKAGSQFVV PHSEMAPFSP SAVGSGAHFL GIPGPDPLQQ PPMTEAASPI  60
SSRTPARPPT VDFDELAPAG VGNCLDHQAL AGGEDAERGG GATGNRWPRQ ETLALLKIRS  120
ELDAAFRDAT FKGPLWEEVC RKLGELGYKR SAKKCKEKFE NVHKYYKRTK EGRAGRQDGK  180
SYRFFSQLEA LYSGSSDGGA TTSTANPAPA PHLVAASSAF SAGMAGPPVS RPQPISAAAP  240
PTMATPTRVA VPDLALPGGL QGLTSSAAAG ITFSWNSYSS SSSSDSDGEE TGDAGENQEG  300
RKRKHGGGSG ASRKMMAFFG RLMNQVMERQ DAMQQRFLEV IEKRDQDRMI RDEAWRRQEM  360
ERLNHEQELL AQERVMAASR DTAIISYLQK ISGQTAAVPP MLATPISIAP LSPQQPFQHP  420
HERSQPPRQQ QQTPRAPAQS PQNRNEFKQH HKSNEVVRHK SSSASEIDPT LEPQEAVGSG  480
SLEPLPSSSR WPKAEVHALI NLRSELESKY QEAGPKGTLW EEISAGIQRL GYNRSAKRCK  540
EKWENINKYF KKVKESNKKR LEDSKTCPYF HQLDAIYRKK LLSSGGTSGG SGNIVGIQGQ  600
QVQEANPPPN QQKSDAVTVM PQEQAPPPPQ QQAGSKHGKH RNSNNQNDGN SEGGEVSLGI  660
QVPTSNGGLP PRFFGEGLNK VTTSPLLPPL KIYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	157	KRSAKKCKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	8e-45	Trihelix family protein