PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV84674.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 27318.4 Da PI: 5.6667 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.2 | 2e-18 | 77 | 126 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g RWV84674.1 77 AYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 126 69****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MACPPNTSEP ETSVNSMSSL SSASSSSSPA LSHTLPEGTM GRCRQSAQAS SKTSGGRGDG 60 GSVAGKRLRD RSSHTSAYRG VRMRNWGKWV SEIREPRKKS RIWLGTFPTP EMAARAHDVA 120 ALSIKGAAAV LNFPELVGSL PRPATLSPRD VQAAAAKAAA MDPGAQKEPP APAPADSDEL 180 GEIVELPPLD DGCCFHDSAD SRNEFLYDDA MDSWAYQLPW VESADPLWAA SDSPLPTSFE 240 ALPWVQGVSV KLSSSNAH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 1e-56 | ERF family protein |