PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV84149.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 253aa MW: 28221.2 Da PI: 4.493 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.9 | 2.6e-09 | 13 | 37 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++Ia +++ gRt++++k++w+++l RWV84149.1 13 RWSLIAGHLP-GRTDNEIKNYWNSHL 37 5*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MSFSSSLSFC HCRWSLIAGH LPGRTDNEIK NYWNSHLSRK IQSFRRTGMD GETAVIDIRN 60 LRGGGGKQQG ACTDRSSMKK KKKKKTNTMN SEIRREKQDM ADIRPPASVM QNDEGHIMVS 120 DPDQNQQASS VTFDGITMDP NEEMVSELWG TDADIEHVLF GPSEESMIGW GYTQADSGVM 180 SSSGVELASK SEDEMGSWQR EKLLGWDLGA NIWDEEAGEM WPWTWDSGNG ELGLHGVDDC 240 GYQQGSLDDG WLI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 79 | 85 | KKKKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 8e-16 | MYB family protein |