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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV84077.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 240aa MW: 26882.1 Da PI: 6.1735 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.6 | 5e-17 | 14 | 84 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT........................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg........................tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++lvd+++q+G g +W++Ia ++ gRt++++k+ w+++l RWV84077.1 14 KGAWSAEEDKILVDYIQQHGHGnwrvmpkkagfdrvsyavfcfavrRWSAIAGSLP-GRTDNEIKNVWHTHL 84 79******************************************************.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MGRAPCCDKV GLKKGAWSAE EDKILVDYIQ QHGHGNWRVM PKKAGFDRVS YAVFCFAVRR 60 WSAIAGSLPG RTDNEIKNVW HTHLKKRMDP KEATRAPKRE KKKKRKRDAK NKLEAEQANQ 120 QPDADAAHRS QRCDDAGFVE VSLEQSYSGF SSAATDSSVM SGDATVDAKD ESFTSKEFKE 180 IDESFWLDAL AVDGPLQLPP AAVADSEAFS DDMEFWLKVF MEADHLEDSS QMNPANVHLN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 85 | 107 | KKRMDPKEATRAPKREKKKKRKR |
2 | 97 | 106 | PKREKKKKRK |
3 | 98 | 106 | KREKKKKRK |
4 | 101 | 106 | KKKKRK |
5 | 101 | 107 | KKKKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 7e-40 | MYB family protein |