PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV84013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 184aa MW: 20172.2 Da PI: 10.3821 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.4 | 1.1e-20 | 38 | 87 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd ++ ++r +lg+f+taeeAa+a++aa+++l+g RWV84013.1 38 RFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDAAARSLRG 87 79*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MVVETLRATM EGTVLAPAEA DGGKESAATM AELGKEKRFR GVRKRPWGRF AAEIRDPWKK 60 TRKWLGTFDT AEEAARAYDA AARSLRGPKA KTNFGCSAAV PAPQIGWRMA SPWQLGFPDP 120 ASAPSGRDLF LRPPAVAVAR GSKFSGYGFE AVTMMMTRVE EEAPEAAKEK KPFWFDLNLP 180 PPPM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 3e-23 | ERF family protein |