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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV83967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 173aa MW: 18862.4 Da PI: 8.8935 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.1 | 2.5e-19 | 82 | 131 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrdp ng +r++lg+f taeeAa a+++a+ +++g RWV83967.1 82 YRGVRQRP-WGKFAAEIRDPGRNG--ARVWLGTFSTAEEAALAYDRAAFRIRG 131 9*******.**********95554..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MGTHPQQQCP GLAVLQRIRS HLLDEELFTA AGATMIDVHY PTLEATGDGS EELCHVAAED 60 SPPLPMPPPR APFPAQERGR NYRGVRQRPW GKFAAEIRDP GRNGARVWLG TFSTAEEAAL 120 AYDRAAFRIR GSRALLNFPL LIGSQETPPP SSTLPPLSGN KRRKRVAALA SDC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 9e-28 | ERF family protein |