PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83884.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GATA

Protein Properties

Length: 502aa MW: 54475.4 Da PI: 8.0504

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83884.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	58.4	9.8e-19	425	459	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l RWV83884.1 425 CSHCGVQKTPQWRAGPLGAKTLCNACGVRFKSGRL 459 *******************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
PFNVPPNAHP LLCLFVASLH FVLSLLRPFF RLFPWPSSAA FSCSSSGLLQ LRTGEVKWKG 60 SAGESCHLFC CLVSGWIQET FFAALLQVES EARMEEALRS SLRPESGLSS GQQQQHQHQR 120 QQNKGTLSED GGWSAERGNL CGEGFLVDDL LNLGDYADND KEAEVSVVRE EVEAKAHQAA 180 DAEHRGISDS NSSSPCSSTS ALSFQPPPPP PLSDISLPVS LPSPRRQSWT TITKFFDGFA 240 FFSLVLWLRF VQAHDVEELE WVSYIIDDSL SEFPHCPAVG GDHFPSPSQS HKKTEEPPAA 300 APQVASSLDS AVCGLSTEGM ASVKAKRSKR LRPRPAHSPA RYMSVPVLFA DSLSSPTNTS 360 SSASSSCSTP CLLYDHNTVA GGDQSFLLHE VPQPPLAPAT KPGPKKRGRK PKPSPTASGS 420 GDRRCSHCGV QKTPQWRAGP LGAKTLCNAC GVRFKSGRLL PEYRPACSPT FVSHIHSNSH 480 RKVLEMRRKK EAQLPSAPVA SF

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

PFNVPPNAHP LLCLFVASLH FVLSLLRPFF RLFPWPSSAA FSCSSSGLLQ LRTGEVKWKG  60
SAGESCHLFC CLVSGWIQET FFAALLQVES EARMEEALRS SLRPESGLSS GQQQQHQHQR  120
QQNKGTLSED GGWSAERGNL CGEGFLVDDL LNLGDYADND KEAEVSVVRE EVEAKAHQAA  180
DAEHRGISDS NSSSPCSSTS ALSFQPPPPP PLSDISLPVS LPSPRRQSWT TITKFFDGFA  240
FFSLVLWLRF VQAHDVEELE WVSYIIDDSL SEFPHCPAVG GDHFPSPSQS HKKTEEPPAA  300
APQVASSLDS AVCGLSTEGM ASVKAKRSKR LRPRPAHSPA RYMSVPVLFA DSLSSPTNTS  360
SSASSSCSTP CLLYDHNTVA GGDQSFLLHE VPQPPLAPAT KPGPKKRGRK PKPSPTASGS  420
GDRRCSHCGV QKTPQWRAGP LGAKTLCNAC GVRFKSGRLL PEYRPACSPT FVSHIHSNSH  480
RKVLEMRRKK EAQLPSAPVA SF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66320.2	6e-39	GATA family protein