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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV83667.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 219aa MW: 24408.8 Da PI: 10.5821 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.2 | 1.6e-07 | 9 | 54 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WT+ + + +a + + ++ +W+ +ar +g g++++++k ++ RWV83667.1 9 SWTAKQNKMFENALAVYDKDtpdRWHNVARAVGGGKSAEEVKRHYE 54 7*******************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MASSSVSSSW TAKQNKMFEN ALAVYDKDTP DRWHNVARAV GGGKSAEEVK RHYELLVEDI 60 LRIETGQPPH AHYRSSSSGR SGTSLFLVLL LRSAIRFHNL HSLVFLEHGF SAHVSIKKPE 120 KNSASNRLVL IEEMGSWICL VFASKSSNPP FQQKPPSLLH RELGPEPLPP AGRRRRNPAL 180 IRSPLDDSFG PPIPTGVAPR RTQAEGRDYE RVISLFGLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 6e-30 | MYB_related family protein |