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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV83572.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 252aa MW: 27072.3 Da PI: 6.4009 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.2 | 7.1e-17 | 56 | 105 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r+++ g+Wv+eIr+p++ + r++lg++ tae+Aa a++ a+ +l+g RWV83572.1 56 PSYRGIRYRS--GKWVSEIREPRK---SSRIWLGTYPTAEMAAVAYDVAAHALRG 105 57*****976..*********854...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MAECPWDMHG HAGESSRAFT SSQLAEQMTR SYDQGAEAPQ TEMEPRVRAG ASRRHPSYRG 60 IRYRSGKWVS EIREPRKSSR IWLGTYPTAE MAAVAYDVAA HALRGTDALL NFPDQIASRP 120 SPLSSSPTHI RVAAAEAAAS LMPSSGAGDE GAGAASAAVA TVAPQQQPGS YIDEEEIFDM 180 PQLLVNMAEG MLMSPPRLSP HGSDDSPEVS EDVPCPLGAS KRVTVRLLRT LARSRSLRAH 240 PGTPSFIEGT QF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 3e-32 | ERF family protein |