PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV81239.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 178aa MW: 19222.6 Da PI: 10.5445 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.6 | 1.1e-16 | 39 | 88 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+WvAeIr+p +kr r++lg++ ta Aa+a++ a l+g RWV81239.1 39 QYRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYSTAVAAARAYDTAVYLLRG 88 69*****99.**********9...336*********************998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MEGECCSSSK ERRKAVTPLT TVEAERSGEG GGGGGRQRQY RGVRMRKWGK WVAEIREPNK 60 RSRIWLGSYS TAVAAARAYD TAVYLLRGRS ARLNFPDEVL TDATEGGGSP RLDLSASSIR 120 KKAIEVGARV DAAMRTMPAS PPPPPPPPPP QSTPRQPSRP AKNPDLNQAP SPESSDVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06746.1 | 2e-26 | ERF family protein |