PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV80908.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 221aa MW: 24733.7 Da PI: 6.1433 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.2 | 2.5e-15 | 5 | 70 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT.....................-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....................tWktIartmgkgRtlkqcksrwqk 46 rg+WT eEd ll ++++ +G g +W++Ia+ ++ gRt++++k++w++ RWV80908.1 5 RGPWTLEEDTLLTHYIACHGEGrwnllakfsaisshqtfgsihRWSRIAQQLP-GRTDNEIKNYWRT 70 89***************************************************.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MEVRRGPWTL EEDTLLTHYI ACHGEGRWNL LAKFSAISSH QTFGSIHRWS RIAQQLPGRT 60 DNEIKNYWRT RVQKQARNMK VDANSTMFRD ALRCHRTPRL LEKIGSSQTM QNLVANTNAP 120 TTDQAQLTSC STVLPQVPVA MSDPNSVTFD QLSSISSSMN NAYDLDAWDL TPMPASDHHT 180 VANNDCGSGV GDGLWCMDEL YDMFKSSLSG AETEVPFACI F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25340.2 | 1e-36 | MYB family protein |