PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV80907.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 352aa    MW: 39172.2 Da    PI: 5.2561
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV80907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS249.31.5e-76434951373
        GRAS  51 arlarsvselykalppsetsekn....sseelaalkl..fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslR 143
                 ar ++  ++ +k l++ +++ ++    + ++++a  l  f +++P+++f++ +aN aI+eaveg   vHi+D++ ++++Q p+L++ La+Rpegpp +R
  RWV80907.1   4 ARASK--TGSCKMLTAVAARADSdlalHLHRFSAIDLasFIDLTPWHRFGYAAANAAIVEAVEGLPVVHIVDLSTTHCMQMPTLIDLLANRPEGPPFIR 100
                 45444..33333333333322222234445555555588************************************************************ PP

        GRAS 144 iTgvgspesg....skeeleetgerLakfAeelgvpfefnvl...vakrledleleeLrvkp....gEalaVnlvlqlhrll...........desvsl 220
                 +T+    ++        ++ e+g+rL +fA++ +v++ef ++    ++++++l +e++rv++    gEa++Vn+++ lh+++           + + ++
  RWV80907.1 101 LTVPTFTTTAtppmLDMSYDELGSRLVNFARSRNVSMEFIMIpsdPSEAFDSL-IEQIRVQRlvseGEAVIVNCQMLLHYIPeetvgaivstmNVNSPI 198
                 **988877767877778899*********************955433344444.788888777777****************88888887777666666 PP

        GRAS 221 eserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319
                  s r+ +Lk+++sl+P++v++ve++ad ++ + + r+ +a++y +  +d++++ lp+ se+r+++E+  l ++i+nv+a+eg +r+er e +++W +r+
  RWV80907.1 199 LSLRTMFLKVLRSLEPTLVTLVEEDADFTACDVVGRLRSAFNYLWIPYDAVDTFLPKGSEQRRWYEAG-LCWKIENVIAQEGLQRVERLEPKGRWAQRM 296
                 6799****************************************************************.9***************************** PP

        GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 ++aGF++v ++e+aa ++k++l +++  g+ +++e++ l+l+Wk++++v++SaW
  RWV80907.1 297 RAAGFRSVGFTEEAAGEVKSMLGEHA-AGWGLKKEDEDLMLTWKGHNVVFASAW 349
                 **************************.999************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
ALIARASKTG SCKMLTAVAA RADSDLALHL HRFSAIDLAS FIDLTPWHRF GYAAANAAIV  60
EAVEGLPVVH IVDLSTTHCM QMPTLIDLLA NRPEGPPFIR LTVPTFTTTA TPPMLDMSYD  120
ELGSRLVNFA RSRNVSMEFI MIPSDPSEAF DSLIEQIRVQ RLVSEGEAVI VNCQMLLHYI  180
PEETVGAIVS TMNVNSPILS LRTMFLKVLR SLEPTLVTLV EEDADFTACD VVGRLRSAFN  240
YLWIPYDAVD TFLPKGSEQR RWYEAGLCWK IENVIAQEGL QRVERLEPKG RWAQRMRAAG  300
FRSVGFTEEA AGEVKSMLGE HAAGWGLKKE DEDLMLTWKG HNVVFASAWM PS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-123GRAS family protein