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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV80711.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 24262.4 Da PI: 8.4786 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.5 | 5.1e-21 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++aa+++++g RWV80711.1 20 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 69 69*******.**********8...557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MAPRAKAANN VGGGEGKEEH FRGVRKRPWG RYAAEIRDPG KKSRVWLGTF DTAEEAARAY 60 DAAAREFRGP KAKTNFPWPD ACINPSPGYG GVASGSSTIE SSGPEEAARA VPSVAVPLPT 120 PLDLDLLYRG GGRSRFPFQP YHPAIPAAQP LLFFNAAAVT GYHRHLPLCP PMIVACFQPP 180 TAVVAQSDSD SSSVVDPHPD HRSPPPALAS KAFSLHLDLN LPPPAETA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 7e-25 | ERF family protein |