PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV80708.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family RAV
Protein Properties Length: 334aa    MW: 37490.3 Da    PI: 10.1148
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV80708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.19.4e-1354102155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+ykGV   + +grW A+I++      ++r++lg+f  ++eAa+a++ a ++++g
  RWV80708.1  54 SQYKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNDEDEAARAYDVAVQRFRG 102
                 78****9888.8*********3.....5**********99************998 PP
2B31031.6e-321782831100
                 EEEE-..-HHHHTT-EE--HHH.HTT......---.....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkke...esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 f+k+ tpsdv+k++rlv+pk++ae+h          +   ++  l +ed  g++W+++++y+++s++yvltkGW++Fvk++gL++gD+++F+++   e+
  RWV80708.1 178 FDKAVTPSDVGKLNRLVIPKQHAEKHfplqqtT---AaacKGLLLNFEDACGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLRAGDVITFQRSTGPEK 273
                 89*************************875542...14557889************************************************9877999 PP

                 ..EEEEE-SS CS
          B3  91 elvvkvfrks 100
                 +l+++++r+s
  RWV80708.1 274 QLFIGWRRRS 283
                 9******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
METSGSDEAC SETEKQSPPP RPSPRGLQRL GSGASVVLDP EVSLEAKLRK LPSSQYKGVV  60
PQPNGRWGAQ IYEKHQRVWL GTFNDEDEAA RAYDVAVQRF RGRDAVTNFK PLVATDGNDA  120
AELLFLNSRS KAEIVDMLRK HTYHDELQQS RRYSGADRRK TCPSHEETFG RGHREHLFDK  180
AVTPSDVGKL NRLVIPKQHA EKHFPLQQTT AAACKGLLLN FEDACGKVWR FRYSYWNSSQ  240
SYVLTKGWSR FVKEKGLRAG DVITFQRSTG PEKQLFIGWR RRSVGRYAAA GVHTPRPPVE  300
VVRLFGVNIV KIPVAVSGDV MDGDGIGWNG RTWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13260.11e-132RAV family protein