PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV80340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 145aa MW: 15979.9 Da PI: 10.0073 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.5 | 1.5e-08 | 4 | 34 | 17 | 47 |
HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 17 kqlGggtWktIartmgkgRtlkqcksrwqky 47 + +G+g+Wk Ia+++ ++Rt+ q+ s+ qky RWV80340.1 4 NVYGKGDWKNIAKYFVTTRTPTQVASHAQKY 34 679***************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 145 aa Download sequence |
MGLNVYGKGD WKNIAKYFVT TRTPTQVASH AQKYFNRMEH ERKAGKRRPS IHDIRNLTAP 60 LGTEAQIRSV YDLVDRKQPF VVGHGCQPRP AASPQLLSSI SAAAEEREAG AASASSPETG 120 QPSLILEQSN TTVTTDPTSW WKKSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G01200.1 | 8e-21 | MYB family protein |