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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV79726.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | SRS | ||||||||
Protein Properties | Length: 184aa MW: 19196.1 Da PI: 8.2579 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 133.1 | 2.9e-41 | 1 | 128 | 34 | 154 |
DUF702 34 dCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkeletss..........lPeevsseavfrcvrvss 122 +C+th+kstWvpaa+rrer+ l+a+++ a +sa+++a+k++r ++++ ++s+t++s+++++++++t+s lP++v+++avf+cvrv+s RWV79726.1 1 ECSTHLKSTWVPAARRRERH--LSASAAAAGSSASTSAPKKPRLV-ASQTGTASHTSTSNTTPPRSFDTTSshqdasvkesLPAHVRAPAVFKCVRVTS 96 6*****************94..45555566677789999999986.778888899999**********99999************************** PP DUF702 123 vddgeeelaYqtavsigGhvfkGiLydqGlee 154 +ddge+e+aY++ v+igG vfkG+LydqGl++ RWV79726.1 97 IDDGEDEYAYHAMVKIGGRVFKGFLYDQGLDD 128 *****************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
ECSTHLKSTW VPAARRRERH LSASAAAAGS SASTSAPKKP RLVASQTGTA SHTSTSNTTP 60 PRSFDTTSSH QDASVKESLP AHVRAPAVFK CVRVTSIDDG EDEYAYHAMV KIGGRVFKGF 120 LYDQGLDDGG SRADDAKDAI PNISELHLGN RNGGASSSSP MLPSDVFGGS GGLMGGTNYG 180 NQMN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12330.1 | 1e-42 | SRS family protein |