PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV79531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 336aa MW: 36724.9 Da PI: 5.0601 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.2 | 1.2e-19 | 119 | 168 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrd + r r++lg+f+taeeAak ++ a+ kl+g RWV79531.1 119 RFRGVRRRP-WGKYAAEIRDpW-----RrVRVWLGTFDTAEEAAKVYDSAAIKLRG 168 79*******.**********88.....55*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
METTLLLPVK RTELVHVTPK PLAPRRPEHA HTHKPRTVRI YCDDLDATDS SGDDEDETEC 60 RTRRRVRRYV QEIRFEVRPS PVCTSSKASK GAVATGRKRK ASAAADVADA DDGDRSVKRF 120 RGVRRRPWGK YAAEIRDPWR RVRVWLGTFD TAEEAAKVYD SAAIKLRGPG AATNFSQPAA 180 DISSASLPPN KHLPDDNLAS VSGAYDSIDE PRNLSSPISV LCGFSSSASS PSPSSRSPTE 240 RAAETPASSS ERSRPDQLVD ILPFDEVPLF DEILGLSYSG PCYFDDSAPI GCLAEEMSDA 300 LFGAGLELDV GLSTWQADDY FKDIGDLFPI EALPAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11140.1 | 1e-26 | ERF family protein |