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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV79381.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | SRS | ||||||||
Protein Properties | Length: 213aa MW: 22810.3 Da PI: 9.0002 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 121.6 | 9.6e-38 | 89 | 193 | 3 | 92 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...............aeaaskrkrelkskkqsal 86 sg++sCqdCGnqakkdC+h+RCRtCCksrgf+C thvkstWvpaakrrerqq+la +++ ++ + skr+re ++ ++ + RWV79381.1 89 SGGMSCQDCGNQAKKDCSHMRCRTCCKSRGFQCPTHVKSTWVPAAKRRERQQHLADSAAAVRHDDrhrgggrstgegssgGGEPSKRPREITACTRLPA 187 7899************************************************99987766655555667777777666555556666666533333222 PP DUF702 87 sstkls 92 ++t+++ RWV79381.1 188 AMTTTT 193 222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MAGFFLGGGG GSQQQRGEQQ GGGIPPSESF FLYGVRGGRG EDVGYTRGFE LWQHHQIQRE 60 QQLYSTAGFP DELPSVAQRP ARGSLGVGSG GMSCQDCGNQ AKKDCSHMRC RTCCKSRGFQ 120 CPTHVKSTWV PAAKRRERQQ HLADSAAAVR HDDRHRGGGR STGEGSSGGG EPSKRPREIT 180 ACTRLPAAMT TTTTYGTTIS CYSQAVPDTV VVI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51060.1 | 2e-29 | SRS family protein |