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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV79091.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 163aa MW: 17400.6 Da PI: 7.4722 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.4 | 1.6e-08 | 22 | 45 | 23 | 47 |
-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47 +W+ Ia ++ gRt++++k++w+++ RWV79091.1 22 RWSVIAGQLP-GRTDNEIKNYWNTH 45 5*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MLLLFQVTPY LSSDADCCVR VRWSVIAGQL PGRTDNEIKN YWNTHIKRKL VGRGIDPQTH 60 LPVHGGGGAT PGKASKPPPS AASPSETERC PDLNLDLSMS LSFSSPTPSE VFAAADPAAD 120 ATSSPTSAVP PRRAHAICLC YHLGLQSSET CSCQENPSHH VVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 6e-20 | MYB family protein |