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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV79052.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 123aa MW: 13538.6 Da PI: 4.6216 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.3 | 5.4e-11 | 9 | 54 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 +WT e ++ + +a + ++ + W++Ia+ ++ g++ +++k+++ RWV79052.1 9 SWTREQEKAFENALATHPEDcsdWWEKIAANVP-GKSIEDVKNHYEL 54 7*********************99*********.***********76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
MEEVSCSSSW TREQEKAFEN ALATHPEDCS DWWEKIAANV PGKSIEDVKN HYELLLEDIN 60 GIESGRVPLP CYPSSSDGDD HANDGSSGKK GGLSHGDPSH SGKASRSDQE RKKGIAWTED 120 EHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 5e-38 | MYB family protein |