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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV78634.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 289aa MW: 30293.7 Da PI: 6.6783 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.5 | 7.8e-19 | 67 | 116 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+WvAeIr+p++ r+r +lg+f tae+Aaka+++a++ l+g RWV78634.1 67 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFSTAEDAAKAYDRAALILYG 116 59****999.**********954...5**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MDHQLHSPIE QHQLSFQSSS STTSDNSNSS NNTTSSAAAA ATVVGDAAAG PSRRGKGKGG 60 PENGKFRYRG VRQRSWGKWV AEIREPRKRT RKWLGTFSTA EDAAKAYDRA ALILYGPRAQ 120 LNLQTSSSAA AAGHHSNGTT AASSTTTTLR PLLPRPSGFP FPIPPPTGAS TSYNYPPPFL 180 YANMTDSTIM APGPAMEPPR VEVGALGTAP GPVVAAGPGS LGLSDPAMEE ISSLAGSVSS 240 SLSLSCPPVM TTESMGSAPL VSSPLWPYDD YDVAASCLWD ETDPFFFDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40220.1 | 1e-23 | ERF family protein |