PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV78471.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 490aa    MW: 51905.5 Da    PI: 5.9777
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV78471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS196.61.6e-601564904342
        GRAS   4 lLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                  L+ +A++++++d++ a+ +L+rl+++  ++g +p+ R+++ f+eAL a l        ++ +p  ++  + ++++aa+k+f ++sP++ f+ +ta q+
  RWV78471.1 156 SLIGAARCLEANDFATAHVILSRLNHHLPSAGaSPLLRAVFLFKEALLALLRP------STAEPLLSA-AELVRHIAAHKAFADLSPVPHFATFTATQT 247
                 7999***********************7666669****************999......444444443.4699************************** PP

        GRAS 102 Ileave.geervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 + ea++ g++ +H iDfd++ G+QW ++ q+La R+    ++pp +RiT+v+++   ++ e+   +++L++fA+ l++++  n++ +  l +l l+ +r
  RWV78471.1 248 VIEALDcGARSIHLIDFDLGLGGQWSSFAQELAGRSrvshSSPPAVRITAVVAE---ESGETVLAADNLRDFARGLNISLAVNFVRVGGLGMLALSGFR 343
                 *****945599**********************999889889***********4...577788899******************9999*********** PP

        GRAS 196 vkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse...sFlerflealeyysalfdsleaklpres...eerikvEr 287
                 +   gE +aV l   ++rll   ++++++  ++L++v+++ P+vvv+v+ e   +++   s+ + ++  +e+y+++++s+ea ++++    e+ ++vEr
  RWV78471.1 344 LAGsGEPTAVVLTPVIFRLLGGGAASPDTAAALLRFVRRVCPRVVVFVDTEGGSGGHhppSLRRTVAAGVEHYATVLESVEAAAAATGareEAVRWVER 442
                 *999****************99999999***********************7764443559999****************8876665556578899*** PP

        GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllr 342
                 +++++++  +v    +        l+ Wre +  aG +p+p+se+a++qa+ l+r
  RWV78471.1 443 VVMRPRVAAAVGEWAS-------GLGPWRELFAGAGWSPLPFSEFAESQAEWLVR 490
                 ******9999865555.......6***************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    
MKHPKALTDS PQQHPPTHHH FSLHSKPLLD SSPTVDSNNV SVTAIYDEPT SVLDHHLTSS  60
PATAPTAAVA AAADLPFLSW AGGGDAHHHH PLLSSDDWDT ASLLFAERCD LPPFTDDSDP  120
QFLDAPFDLP FDPFAAAADH AIPSPTSSFD RSQLDSLIGA ARCLEANDFA TAHVILSRLN  180
HHLPSAGASP LLRAVFLFKE ALLALLRPST AEPLLSAAEL VRHIAAHKAF ADLSPVPHFA  240
TFTATQTVIE ALDCGARSIH LIDFDLGLGG QWSSFAQELA GRSRVSHSSP PAVRITAVVA  300
EESGETVLAA DNLRDFARGL NISLAVNFVR VGGLGMLALS GFRLAGSGEP TAVVLTPVIF  360
RLLGGGAASP DTAAALLRFV RRVCPRVVVF VDTEGGSGGH HPPSLRRTVA AGVEHYATVL  420
ESVEAAAAAT GAREEAVRWV ERVVMRPRVA AAVGEWASGL GPWRELFAGA GWSPLPFSEF  480
AESQAEWLVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.12e-42GRAS family protein