PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV78408.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 214aa MW: 22850.7 Da PI: 10.434 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.6 | 4.1e-20 | 18 | 68 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++aa+ +l+g RWV78408.1 18 TRFRGVRKRP-WGRFAAEIRDpWK----KARVWLGTFDSAEDAARAYDAAAIALRG 68 589*******.**********883....5*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 214 aa Download sequence |
MRKGRSPAPE AVAAVVETRF RGVRKRPWGR FAAEIRDPWK KARVWLGTFD SAEDAARAYD 60 AAAIALRGPK AKTNFPLSTT TAASPPPLIL TTFNPSAAAA RLTIGHRQLP YPLPQRPTSS 120 SHSSTVESSS GPRLPAAAGA TPIHLRASHL GRQGNPPPPR VLAGEGDFHS DCGSSSSVVD 180 DDGDIASAYR LPLPFDLNFL PPPDDDFQTT ALRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G50640.1 | 4e-21 | ERF family protein |