PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV77773.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 364aa MW: 41944 Da PI: 4.7907

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV77773.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	98.7	5.7e-31	42	141	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++++++d+ +++++sws ++nsfvv+d++ fa ++Lp+yFkh+nf+SFvRQLn+Y + + + k + + weF+++ F +g+k+ll++ik RWV77773.1 42 FLTKTFDMVDDPVTDQMVSWSLTSNSFVVWDPHAFAMTLLPQYFKHNNFSSFVRQLNTYLLSVGFPQGFR-KVDADRWEFSNEGFLRGQKHLLRTIK 137 9******************999*******************************76665555544.445788****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k RWV77773.1 138 RRKP 141 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MDPLLDIVNE EYLEASSFYT QVPPVEPPRP MKGLHGVGPP PFLTKTFDMV DDPVTDQMVS 60 WSLTSNSFVV WDPHAFAMTL LPQYFKHNNF SSFVRQLNTY LLSVGFPQGF RKVDADRWEF 120 SNEGFLRGQK HLLRTIKRRK PPSYLPPRQQ STGPFLEVGH FGLDGEINRL KRDKNILMAE 180 VVKLRQEQQN TRAELQAMEE RLQCTEQRQQ QMMNFLARAL QSPDFFQQLV QRQGKRKELE 240 EAISKKRRRP IEAGPYHGDG ETSQSQEIEP PFDVETGQIE GNYDPEVSEL EDIALKIQGL 300 GRNKEDEVKQ EGGDTELNDE FWEELLNEQI EEEKGRSEGR KRGDDNDIGL LADRLGYLSS 360 TSPK

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MDPLLDIVNE EYLEASSFYT QVPPVEPPRP MKGLHGVGPP PFLTKTFDMV DDPVTDQMVS  60
WSLTSNSFVV WDPHAFAMTL LPQYFKHNNF SSFVRQLNTY LLSVGFPQGF RKVDADRWEF  120
SNEGFLRGQK HLLRTIKRRK PPSYLPPRQQ STGPFLEVGH FGLDGEINRL KRDKNILMAE  180
VVKLRQEQQN TRAELQAMEE RLQCTEQRQQ QMMNFLARAL QSPDFFQQLV QRQGKRKELE  240
EAISKKRRRP IEAGPYHGDG ETSQSQEIEP PFDVETGQIE GNYDPEVSEL EDIALKIQGL  300
GRNKEDEVKQ EGGDTELNDE FWEELLNEQI EEEKGRSEGR KRGDDNDIGL LADRLGYLSS  360
TSPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	235	249	KRKELEEAISKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-100	HSF family protein