PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV77733.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HSF
Protein Properties Length: 320aa    MW: 34684.5 Da    PI: 5.5204
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV77733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind94.98.7e-30351302102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT....TEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY....gFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                   F+ k+y++++d++++ +i w +++nsfvv+d+  f++ +Lp++Fkh nf+SFvRQLn+Y    gF+kv+ ++         weF+h sF +g+++ll
    RWV77733.1  35 FVLKTYRMVDDPSTNAVIAWGRDNNSFVVVDPFAFSQLLLPSHFKHGNFSSFVRQLNTYvrerGFRKVDPDR---------WEFAHASFLRGQTNLL 122
                   9**********************************************************9999999999988.........**************** PP

                   XXXXXXXX CS
  HSF_DNA-bind  95 ekikrkks 102
                   + i r++s
    RWV77733.1 123 RLIVRRNS 130
                   *****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEDGSPRFSG GHHRFGLGGG GGAGRGGGVP VAAPFVLKTY RMVDDPSTNA VIAWGRDNNS  60
FVVVDPFAFS QLLLPSHFKH GNFSSFVRQL NTYVRERGFR KVDPDRWEFA HASFLRGQTN  120
LLRLIVRRNS GGGGKKNERG EEEEGEEEEE ERVAAEVVRL KQEQRRIDER VEEMWRRVKE  180
TERKPSQMLA FLVKVAGDPK LLSRLGAGPA PGGIEGGEKR ARLRSGDEYE RVQETEGGGV  240
GRWQFDGESM AARDGEEGMM LGGGDGANQF PGTSDPIGFY GGGPAWVGGE FGGMEGDGLG  300
LGLGGGSTAY PFPSHMGYES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.13e-50HSF family protein