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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV77617.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 393aa MW: 43431.8 Da PI: 6.8401 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.3e-19 | 170 | 219 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrd + r r++lg+++taeeAak ++ a+ +l+g RWV77617.1 170 RFRGVRRRP-WGKYAAEIRDpW-----RrVRVWLGTYDTAEEAAKVYDSAAIQLRG 219 69*******.**********88.....55*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 393 aa Download sequence |
MPRLPWKYHF SFAFLLSSLR VFHFAGIAKE IGFLCCVSVL SRWIAGEGVE QIDANRIEQS 60 YQGTMEVTLL MVPTKRTEHV DVTPKTLPLL HPKHRHCDAA RPRKVRIFCD DHDATDSSGD 120 EGHRRRVRRY VQEIRFEARP QAAGKSKPAR KRKPAALAAT EAGSGDAVRR FRGVRRRPWG 180 KYAAEIRDPW RRVRVWLGTY DTAEEAAKVY DSAAIQLRGP DATTNFSRPM AAAHPPSHPP 240 PTKCPSNSNL TFVSGGYDSG EESRNLSSPT SVLHGFSSSL TTSKEVAESP RPPPEVTDPD 300 ESGRSMLTSG IVPGQLSGFL PFEEAMFHDD FLDFGAAEPS LFDDSAQIGF IAGDLSHTFI 360 GSDLDCGSST WQAGDDYFQD IADLFPIEPL AAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.1 | 7e-26 | ERF family protein |