PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV77173.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 330aa MW: 37857.2 Da PI: 10.3546

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV77173.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.4e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEdell ++vkq+G++ W ++++mg ++R +k+c +rw +yl RWV77173.1 4 RQRWQPEEDELLREYVKQYGPKEWGMVSERMGrpLHRDPKSCHERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	35.3	2.7e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l + + +++G++ Wk+Ia++++ gRt+k + +w + RWV77173.1 59 KGSLTPEEQSLVISLQARYGNK-WKAIAAHLP-GRTPKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MRERQRWQPE EDELLREYVK QYGPKEWGMV SERMGRPLHR DPKSCHERWK NYLRPGLKKG 60 SLTPEEQSLV ISLQARYGNK WKAIAAHLPG RTPKRLGKWW EVFKEKQLKL ANQSGSGSGR 120 HPYPYSHHPA PVSAPRVAPA AASSSAYEHI LQTFAEKHAL LREAPFSVDH CSSPSPSSVL 180 SSATAAVPSV ALSLSPPQSP ALAAHRVPIL VQMCQEVEEG RRAWVQHRKE AVWRLSRLEQ 240 QMETEKARKK MEKVEEVEAK IQRLRDEERA RLERVEGEWR EKVTQLRIEA EAEEAKMAEA 300 WARKQAKLAT LIRRIAGDGA RFFNFSCNVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	8e-52	MYB family protein