PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR98169.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | TCP | ||||||||
Protein Properties | Length: 421aa MW: 47070.3 Da PI: 10.0662 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 129.8 | 2.7e-40 | 114 | 267 | 4 | 135 |
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssasec....eaessss 80 + rhski T++g+RdRR+Rls+++a++fF Lqd+LGfdk+skti WL++++k+ai elt+ +s+s+ e+ ++++ RWR98169.1 114 NRERHSKIFTAQGLRDRRMRLSVDVARKFFGLQDMLGFDKASKTIGWLMTKSKTAINELTKGlsqsdgcggdsdggdqnlTSESED-IsgldETTADVN 211 689**********************************************************9888888888887777654333332.235555555566 PP TCP 81 sasnsssgkaaksaakskksqksaa.salnlakesrakarararertrekmriknk 135 +++n+ ++k+ +a+k +++q s++ + akesra ara+arertrekm++k + RWR98169.1 212 QQENDLKQKSLVAAPKVNRNQGSKKvAICPAAKESRAIARAKARERTREKMSKKLD 267 666666667777777665555555404566677******************99855 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 421 aa Download sequence |
MFPFNHGKNC IPHSYDADQC LLGEQTFSRN EPTSSFIQFS PFLYHNSRFL NYEHELLSRH 60 LTKPPQMVST FTAITSVADV GANNTEMAVL GTTQKMLFCK KRSPVAVGRK RSSNRERHSK 120 IFTAQGLRDR RMRLSVDVAR KFFGLQDMLG FDKASKTIGW LMTKSKTAIN ELTKGLSQSD 180 GCGGDSDGGD QNLTSESEDI SGLDETTADV NQQENDLKQK SLVAAPKVNR NQGSKKVAIC 240 PAAKESRAIA RAKARERTRE KMSKKLDKSK QLPNGSTHGP YGLKPLSPLG FPRESSSRIS 300 HDKKSFELGG DINEPNKLGI STYDYYQHIL NSQGENSSGL HAQGHVLAVV IHPTCIYLQA 360 FDLTHGLEHG KLSTIVFSSL MELKVGGQGH MVWQFLRVKL ENIARHVKRN KRNTEYWSSF 420 Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 8e-24 | TCP family protein |