PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR98120.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 327aa MW: 36868.6 Da PI: 9.1089

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR98120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4.1e-05	172	191	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C C+k+F+r n++ H+ RWR98120.1 172 FSCAVCHKTFNRYNNMQMHM 191 89*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MTRRRSQKNL GSRACRSCLT LVRHPMHSLL LFSRPLVPPI STARASIPPS PSYISPLLSS 60 LTHTHTLSHS VTETHDMHST PIPSTAVEED EGEESSIFLT LSPPGQQATT AHQHRHGPTS 120 TYTDTNVTVA LHIGPPGNYN TNSNAISRET HHHHHQYWIP SPAQIMLGPA RFSCAVCHKT 180 FNRYNNMQMH MWGHGSEYRK GPDSLKGSKP PSTMLRIPCY CCAQGCKNNI EHPRSKPLKD 240 FHTLQTHYKR KHGAKPFECR RCAKAFAVRG DWRTHEKNCG KLWFCTCGSD FRHKRSLKDH 300 VRAFGAGHEP HGVELCEEEE EENVGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-108	C2H2 family protein