PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR98035.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 259aa MW: 30012.8 Da PI: 4.9543 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.4e-15 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l+ ++++G ++W+t +++ g+ R++k+c+ rw++yl RWR98035.1 13 KGTWSAEEDQILISFIRRFGYDNWRTLPKRAGLLRCGKSCRFRWLNYL 60 799*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 27.7 | 6.2e-09 | 66 | 104 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE+e++ ++kqlG++ ++ gRt++++k++w+++l RWR98035.1 66 RGNYSKEEEEIIDSLHKQLGNR--------LP-GRTDNEIKNYWNTHL 104 899*****************99........**.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MEKACCVKVG LKKGTWSAEE DQILISFIRR FGYDNWRTLP KRAGLLRCGK SCRFRWLNYL 60 SPDIKRGNYS KEEEEIIDSL HKQLGNRLPG RTDNEIKNYW NTHLKKRKKN QAMTETRQTS 120 IENSSSSTNK EEFFQPIPAQ MILEYLENDL IFSQSSSSNF ASDNGSMAKN IKQSNEVVVE 180 QFMQSETAHE LGTSINFQSL LAELYTPEEY SLSSFEDPVL QFPLSPLSMG EYDYLPLQYN 240 TEMNILFNNY EEGEMPLTI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 105 | 109 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 1e-53 | MYB family protein |