PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR97489.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 279aa    MW: 31480.1 Da    PI: 5.1261
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR97489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-18118169256
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                 +++GVr+++ +g+++AeIrd      k +r++lg+f tae+Aa a+++a+++++g+
  RWR97489.1 118 HFRGVRRRP-WGKFAAEIRDS---SrKGARVWLGTFTTAEQAALAYDKAALRMRGP 169
                 69*******.**********3...2234**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MATAESDKLL ADMWASFIAG GAPMKCSSDN EEHSKKSTSP QTWEDLPHLK RDGSAELLQR  60
LPSLGRWISM GEEDWEQLLD GNIEGNNCEP SASNCTSGGA ELASEPKDIR RQKTVNRHFR  120
GVRRRPWGKF AAEIRDSSRK GARVWLGTFT TAEQAALAYD KAALRMRGPR TYLNFPLEVV  180
EEALGHDLNS TSSCSQSSKT SYRFKLDGGY HYPVLDHDER SSNTIKRAAN EWDYNDNIMI  240
ETPMWKRLAC IEEIFRNELD VVELQDLGND YLESLLASL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.15e-35ERF family protein