PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR97419.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 219aa MW: 25096.2 Da PI: 7.9493 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32 | 2.3e-10 | 50 | 99 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55 + +E+rRR ++++ +++L +l+P+ +s+ + ++ L +A+++Ik Lq RWR97419.1 50 RKTVEKRRRIQMKTLYSKLNSLIPHhH---HSGDvPMLSDQLDEAINHIKTLQ 99 5789*********************66...666657788*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MTQAPMCRPI FPQCKGSRFK QMSGEKLFAG VEETMEEDKK KCHPLPKMDR KTVEKRRRIQ 60 MKTLYSKLNS LIPHHHHSGD VPMLSDQLDE AINHIKTLQE DLEKMKERKK SLMGMDEINK 120 RMNMGTAIGL QPTRIEIQDL GSTMVVLLIS GLDNQLIFYK SICVLEEEGA EVVNATYYIM 180 DDKVFHTIHS KIPDCELGYK GAKISGRLHE LVHEISSNL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 39 | 58 | KKKCHPLPKMDRKTVEKRRR |
2 | 55 | 59 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 4e-37 | bHLH family protein |