PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR97139.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 325aa MW: 37013.2 Da PI: 8.4048

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR97139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.7e-05	163	182	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ RWR97139.1 163 FSCSVCNKTFNRYNNMQMHM 182 89*****************9 PP
2	zf-C2H2	15.3	5.7e-05	247	269	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F + + ++H +++ RWR97139.1 247 FMCRKCGKPFAVRGDWRTHEKNC 269 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MGIRKYHADE MGLCFQSPPF IEWLKPSPST PSPSIPQQLQ LTSPIGCLQL PIFYHHQQQQ 60 DEILEQGTQC LPLLSRFRET KPLKEEDGGF LKESLGVGDE KSEKVTVALH IGLPNSGGFD 120 GENKGSECKE EESMKKSFEE CVNTESRFWI PTPAQILIGP TRFSCSVCNK TFNRYNNMQM 180 HMWGHGSQYR KGPESLRGTQ PTAMLRLPCY CCAHGCKNNI NHPRAKPLKD FRTLQTHYKR 240 KHGVKPFMCR KCGKPFAVRG DWRTHEKNCG KLWFCTCGSD FKHKRSLKDH IRAFGKGHSP 300 HPSHKDFEDE KECVTGSEDE EVISG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-110	C2H2 family protein