PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR97102.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

E2F/DP

Protein Properties

Length: 491aa MW: 54722.5 Da PI: 4.618

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR97102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	83.9	1.3e-26	146	211	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg RWR97102.1 146 RYDSSLGLLTKKFISLIKHAEDGVLDLNKAASTL---EV--QKRRIYDITNVLEGVGLIEKKLKNRIRWKG 211 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MSGGGQAPAS SRSAQPILQP LRRHFPFSSG KPPFSAAADD YHQFSSGGRE RHHVSDDDDD 60 DDMNGAIIVK SPPLKWKSEV ELSEWVTSPG YAEVVNSPLC IPMSGKGGRT TNRSKVSKSS 120 ISGPQTPVLN VGSPPGNTPT PVGTCRYDSS LGLLTKKFIS LIKHAEDGVL DLNKAASTLE 180 VQKRRIYDIT NVLEGVGLIE KKLKNRIRWK GLDVDRGLDV SGPGVVDDDV EILQEEVQDL 240 SMEEQRLDDE IREMQERLRE MSEDEHNQKW LYVTEEDIKG LPCFQNETLI AIKAPHGTTL 300 EVPDPDEAAD YPQRRYRIVL RSTMGPIDVY LVSQFEEKFE EMNGVEAPPN HLPASSSRSA 360 ETPAVATLME SQRKEMESEA HPDAHRMCAE LNASQDFVGG IMKIVPSDVD TADYWLLSDA 420 EVSITDMWNT EAAVEWNGID RFNAKRYGTD GLNQETEMGR FLQYSIEDLK VPICCLRIVF 480 IPKVDVYKKQ V

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MSGGGQAPAS SRSAQPILQP LRRHFPFSSG KPPFSAAADD YHQFSSGGRE RHHVSDDDDD  60
DDMNGAIIVK SPPLKWKSEV ELSEWVTSPG YAEVVNSPLC IPMSGKGGRT TNRSKVSKSS  120
ISGPQTPVLN VGSPPGNTPT PVGTCRYDSS LGLLTKKFIS LIKHAEDGVL DLNKAASTLE  180
VQKRRIYDIT NVLEGVGLIE KKLKNRIRWK GLDVDRGLDV SGPGVVDDDV EILQEEVQDL  240
SMEEQRLDDE IREMQERLRE MSEDEHNQKW LYVTEEDIKG LPCFQNETLI AIKAPHGTTL  300
EVPDPDEAAD YPQRRYRIVL RSTMGPIDVY LVSQFEEKFE EMNGVEAPPN HLPASSSRSA  360
ETPAVATLME SQRKEMESEA HPDAHRMCAE LNASQDFVGG IMKIVPSDVD TADYWLLSDA  420
EVSITDMWNT EAAVEWNGID RFNAKRYGTD GLNQETEMGR FLQYSIEDLK VPICCLRIVF  480
IPKVDVYKKQ V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-147	E2F/DP family protein