PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR97065.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | C2H2 | ||||||||
Protein Properties | Length: 363aa MW: 41825.5 Da PI: 6.7907 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.4 | 0.00098 | 72 | 94 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H RWR97065.1 72 CSyeGCGKTFFDAGALRKHFHIH 94 77779**************8776 PP | |||||||
2 | zf-C2H2 | 13.1 | 0.00028 | 99 | 123 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cg+ F ++s L+rH H RWR97065.1 99 HTCHweGCGRKFLDSSKLRRHFLIH 123 79*******************8877 PP | |||||||
3 | zf-C2H2 | 22.2 | 3.5e-07 | 129 | 153 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL+ H+rtH RWR97065.1 129 FVCPheGCGKAFSLDFNLRAHMRTH 153 89**********************9 PP | |||||||
4 | zf-C2H2 | 16.5 | 2.4e-05 | 159 | 183 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi+ H RWR97065.1 159 HICPfkDCGKRYAHEYKLKTHIKAH 183 68*********************96 PP | |||||||
5 | zf-C2H2 | 17.6 | 1.1e-05 | 222 | 247 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp Cgks+ + + L+ H+r+ H RWR97065.1 222 YACPyeGCGKSYIHEYKLNLHLRReH 247 89*********************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
MEQHPNPIVK NKTPAVKWFK EWVPQEVVAT GGKCLVLKWV TEDMLKALKE KHKEPEQKEP 60 EPEPTTEVLF LCSYEGCGKT FFDAGALRKH FHIHGEKQHT CHWEGCGRKF LDSSKLRRHF 120 LIHTGERDFV CPHEGCGKAF SLDFNLRAHM RTHSQENYHI CPFKDCGKRY AHEYKLKTHI 180 KAHHEKNTTM DVIKHTAQAE KTHSTPKTPA VAYGSASSDR PYACPYEGCG KSYIHEYKLN 240 LHLRREHPGH NSEENGKQTP DMDNDMDEAS DHDAYPGKGG NSKSVKRNKP VPSSKIQPSK 300 VAQRKGSNLA PVNLNVTRKQ QWPSKEMYEE DSEETEEDRE NVDEDGWRYG DNNEDDEETE 360 YED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 1e-128 | C2H2 family protein |