PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR97003.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 102aa    MW: 12084.4 Da    PI: 4.4683
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR97003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.5e-09851344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      W+ eEd+++ +a + +  +   +W  +a+++  gR+  ++k ++
       RWR97003.1  8 DWSREEDKIFERALAVYDQEtpdRWQNVASMVT-GRSVDEIKRHY 51
                     6*****************99************9.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MVCGVHSDWS REEDKIFERA LAVYDQETPD RWQNVASMVT GRSVDEIKRH YEILVEDLNF  60
IESDMIQLPN YVMSDPGERR CKKQEEAAGW TEKEQREYKG QQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.26e-27MYB_related family protein