PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR96810.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 135aa MW: 15192.4 Da PI: 9.7048 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.3 | 1.8e-05 | 33 | 73 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r R +++ +++ L++l+ + +K + a++L +A+ YIk Lq RWR96810.1 33 RERKEKVGEKITALQQLVSPF-----GKTDTASVLSEAMGYIKFLQ 73 78889999**********998.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MTELKRRQEY IDHGDRFCST VKRHKTQGSL SMRERKEKVG EKITALQQLV SPFGKTDTAS 60 VLSEAMGYIK FLQEQVQVLS APYLQTTPTG NPLESEYYSL QSRGLCLVPV TWTLSIARTN 120 GADLWAPVVK NTPSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05710.3 | 8e-51 | bHLH family protein |