PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR96394.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C3H
Protein Properties Length: 310aa    MW: 34010 Da    PI: 6.7641
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR96394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH39.59.3e-13199225127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 ykte+C+ +  tG+C+yG++C++aHg+
  RWR96394.1 199 YKTEICNSWVDTGFCRYGSKCQYAHGK 225
                 9************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MKGSSNEPIP FLSPISFDFL DEDDDRYRYK EERHITGMCY NNGRNSNSLS NNSFPLIDST  60
NNQRPRYPTP PANAFLGLGG PLLSPLAVDL GPTIPRYPPP PSAAAEAFLS VAETDLLNSR  120
RRAMRSLSSS RGSSPSPLSP IENLETPPSR SPPGFKRTTP TQGKVSREEV LVMDGILVDA  180
CVNRTVTRPP LDSSANILYK TEICNSWVDT GFCRYGSKCQ YAHGKEELRP SRPRKFKPES  240
PRGSKAHQDG ETTETVEASP AKTATESEEM VAAAIGGSIT DAEAYINKVL YGPSQRRRLP  300
VFEEICPSDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.16e-10C3H family protein