PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR96290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HSF | ||||||||
Protein Properties | Length: 446aa MW: 50955.5 Da PI: 6.1413 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 115 | 4.9e-36 | 14 | 104 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d+++++++sws n nsf+v+++ efa+++LpkyFkhsnf+SFvRQLn+YgF+k++ ++ weF++++F +g+++ll++i+ RWR96290.1 14 FLTKTYEMVDDPSTNSVVSWSPNDNSFIVWNPLEFARDLLPKYFKHSNFSSFVRQLNTYGFRKIDPDQ---------WEFANEEFLRGQRHLLRNIH 101 9********************999*****************************************999.........******************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k RWR96290.1 102 RRK 104 *98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 446 aa Download sequence |
MDASQGSSNG PPPFLTKTYE MVDDPSTNSV VSWSPNDNSF IVWNPLEFAR DLLPKYFKHS 60 NFSSFVRQLN TYGFRKIDPD QWEFANEEFL RGQRHLLRNI HRRKPIHSHS QPPNQGQGAL 120 SEAEKQELED EIEKLKHEKS MLLVELQRHK QQRHGMDLQM QSLEERLHHM EQCQRKMMTF 180 LTRIVKKPGF ISNLIQQSES HSKKRRLPKP DYFYEEADPG DNRVMSFQTT SRDKTDIISV 240 QVLNLEPFEK MESSINSWEN FFRGVGHASG EEVHSGGVVW QPSAVVLTEM NSSSGDPDIN 300 LQPSSPKFHS SSPQSRDIHS SPELTESMTY AESPSLSSIQ VHADIRSKAS GIDVNSKPAA 360 TEVQSSMEHV NVASAAATGV NDMFWEQFLT ETPGSLDTQE VQSERRETDG KRSENKPADR 420 GNYWWNRKNV DHLTEQMGQL TPAERT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45710.1 | 1e-99 | HSF family protein |