PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96006.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB_related

Protein Properties

Length: 611aa MW: 68169.9 Da PI: 6.8215

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.6	2.5e-12	108	148	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W ++E+ ll+++++++G g+W+ +a+++g +++ qc++++ RWR96006.1 108 WNADEEILLLEGIEMYGLGNWAEVAEHVG-TKSKQQCIEHYK 148 ***************************.********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 611 aa Download sequence
MGRYRGVPNS TDEDPTQRNK RRRPASSGEN LETVASGQGT IDGKRALYHC NYCNKDISGK 60 IRIKCVKCPD FDLCVECYSV GGEVTPHKSN HPYRVMDNLS FPLICPDWNA DEEILLLEGI 120 EMYGLGNWAE VAEHVGTKSK QQCIEHYKSA YLNSPCYPLP VIHLFSCFLS VLIYLLLDMS 180 HVVGKNRKEL LAMAKVQGEG KKGFPSTVEN TPKEDSPFSP SRVKIEDSSK EGLVGRSPSG 240 LIADGDSGES KMSGVGCINT NAVSTGAGKQ ASFKDGSDGI KVDGLTAAEE TQIDRSVGGK 300 KPKNSGDDGP SMTELSGYNP KRQEFDPEYD NDAEQMLAEM EFKDTDNEAE RELKLRVLRI 360 YCSRLDERKR RKDFVLERNL LYPNPIEKEL SSEEKEIYNR CRVFMRFQSQ EEHEAFVQGL 420 IDEHRIRKRI QELQEARAAG CRTRAEADAF LAQKRKKESE ANARKAKETG QLITNGKVLQ 480 RANRPMKGES EGSPRSAVDN PKMKGSIGLE SGGKDSSSTT TGANTKSLDE WDITGLPGAD 540 LLTETEQQFC CQNRLLPSHY LKMLEVLTVQ AMTGNITKRS DAYCLFKVDT NKVDRVYDMA 600 MKKGLVKRDE A

Sequence ? help Back to Top

Protein Sequence Length: 611 aa Download sequence

MGRYRGVPNS TDEDPTQRNK RRRPASSGEN LETVASGQGT IDGKRALYHC NYCNKDISGK  60
IRIKCVKCPD FDLCVECYSV GGEVTPHKSN HPYRVMDNLS FPLICPDWNA DEEILLLEGI  120
EMYGLGNWAE VAEHVGTKSK QQCIEHYKSA YLNSPCYPLP VIHLFSCFLS VLIYLLLDMS  180
HVVGKNRKEL LAMAKVQGEG KKGFPSTVEN TPKEDSPFSP SRVKIEDSSK EGLVGRSPSG  240
LIADGDSGES KMSGVGCINT NAVSTGAGKQ ASFKDGSDGI KVDGLTAAEE TQIDRSVGGK  300
KPKNSGDDGP SMTELSGYNP KRQEFDPEYD NDAEQMLAEM EFKDTDNEAE RELKLRVLRI  360
YCSRLDERKR RKDFVLERNL LYPNPIEKEL SSEEKEIYNR CRVFMRFQSQ EEHEAFVQGL  420
IDEHRIRKRI QELQEARAAG CRTRAEADAF LAQKRKKESE ANARKAKETG QLITNGKVLQ  480
RANRPMKGES EGSPRSAVDN PKMKGSIGLE SGGKDSSSTT TGANTKSLDE WDITGLPGAD  540
LLTETEQQFC CQNRLLPSHY LKMLEVLTVQ AMTGNITKRS DAYCLFKVDT NKVDRVYDMA  600
MKKGLVKRDE A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	368	373	RKRRKD