PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR95916.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | Nin-like | ||||||||
Protein Properties | Length: 510aa MW: 54442.9 Da PI: 6.1075 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 76.1 | 4.1e-24 | 414 | 463 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++l+dl +yF+lpi++A+k Lg+c TvLK+iCR++G+kRWP+Rkiks+ RWR95916.1 414 VKLKLNDLINYFHLPIQAASKRLGLCSTVLKKICRRNGLKRWPYRKIKSI 463 5799********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 510 aa Download sequence |
MLLSPTVPAV LPPAATSSHG GGGGGRRAIY VAADLRFIRD LGLVAEISLF TRPSKRRLRS 60 VSGTSSAHLV LGIAGFASVA VPGPSTWSPC TATHALRRNM DPGSSHPNQL DSPSSSNVLR 120 FWEDPIPDFD FPYTQNDPTS SAGHLHPPPF PSAGSSHGTC EPFDHLTDNC KLLGLDDKLE 180 IEQGDNCYQS DFNNGLVIGD GNPGDGNAST SNVVYDINNP SWAPDGQLNC DGCQVLREVI 240 HSNGIDTTKL QIHGTVGFLY HGIIEVVLCG ASNEVPVSVQ HQLIDFSSHS FEQVKQYLIE 300 YGQMRTREGF SVIQDSLSAF YDCLCVGMSS GDAISTGMLG PDANGNDATG TGTWGLDADG 360 IGTSGGDDAN LNPSAPVQSV EQSGLGGQLM PTNEESSLAR LPKSNMAAQR QRTVKLKLND 420 LINYFHLPIQ AASKRLGLCS TVLKKICRRN GLKRWPYRKI KSIDKSIKSL QQSLASTSGQ 480 ENASVQAEIE KLQHIRGDIC AGILSECNAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35270.1 | 9e-11 | Nin-like family protein |