PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95913.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB_related

Protein Properties

Length: 695aa MW: 77894.8 Da PI: 6.231

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95913.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.2	9.1e-09	580	628	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lvd+v ++G g+W+ I r + Rt ++k++w+++l RWR95913.1 580 AWTLGEVMKLVDGVSRYGAGRWSEIKRLAFasyTYRTSVDLKDKWRNLL 628 7**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MSTKICSGWW HNSMERLVDA GGNAETNIEE INVEKDSSSL SLTKRIADPV VYKLVRVEGD 60 GRFVPATDDE LMEVENLLED DKGELPFVEE HRYPKECISS DGFSSEKAGL ESSEDMPGLS 120 QTENMEVDAR KLMNARLEYI GEMLQKVKQE EKLRLSSESP DSSSNCMNVD CPSPDKHNQS 180 PIMHDKPHGE NSLLETDSLQ LPKLNDTDTT QVASAEMCPE TRRSVFGESS ASNTPTTRKP 240 DFSTIKGDIC LDNLSIRELH ETFRATFGRE TSVKDKLWLK RRIAMGLTNS CDVSTTSFII 300 KDKTLIRKKE KEVVSGLENS NTADGSLSRD EIVGATSDDH RDQITSLTEK SEDRQVLSGK 360 RLRTSQTEYD AKNEVEADMK REYLHMQQTG VKRVRKPTRR YIEELSEVET RECSGRSVSS 420 FKNSDHGQPS LKSWVRPVGT GSVDLVGTSV FTRHDSLEGP GVQIPHVSRV RRGRPRENFL 480 PLMTYHSSGM TEKFDEKVVG VNASRQDGES GSNMRALNEQ ILQPTSTEAE KESLPGVTHT 540 VEQRQDLEPE KLESSQDNSD ENLTTVPTSK SGTRRKHHRA WTLGEVMKLV DGVSRYGAGR 600 WSEIKRLAFA SYTYRTSVDL KDKWRNLLRA SLSQAPATDQ GVKSSRKHAS IPIPADILVR 660 VRELAETHSQ VAPERSSCKW AGHSKSLHES RSGYL

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MSTKICSGWW HNSMERLVDA GGNAETNIEE INVEKDSSSL SLTKRIADPV VYKLVRVEGD  60
GRFVPATDDE LMEVENLLED DKGELPFVEE HRYPKECISS DGFSSEKAGL ESSEDMPGLS  120
QTENMEVDAR KLMNARLEYI GEMLQKVKQE EKLRLSSESP DSSSNCMNVD CPSPDKHNQS  180
PIMHDKPHGE NSLLETDSLQ LPKLNDTDTT QVASAEMCPE TRRSVFGESS ASNTPTTRKP  240
DFSTIKGDIC LDNLSIRELH ETFRATFGRE TSVKDKLWLK RRIAMGLTNS CDVSTTSFII  300
KDKTLIRKKE KEVVSGLENS NTADGSLSRD EIVGATSDDH RDQITSLTEK SEDRQVLSGK  360
RLRTSQTEYD AKNEVEADMK REYLHMQQTG VKRVRKPTRR YIEELSEVET RECSGRSVSS  420
FKNSDHGQPS LKSWVRPVGT GSVDLVGTSV FTRHDSLEGP GVQIPHVSRV RRGRPRENFL  480
PLMTYHSSGM TEKFDEKVVG VNASRQDGES GSNMRALNEQ ILQPTSTEAE KESLPGVTHT  540
VEQRQDLEPE KLESSQDNSD ENLTTVPTSK SGTRRKHHRA WTLGEVMKLV DGVSRYGAGR  600
WSEIKRLAFA SYTYRTSVDL KDKWRNLLRA SLSQAPATDQ GVKSSRKHAS IPIPADILVR  660
VRELAETHSQ VAPERSSCKW AGHSKSLHES RSGYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-122	MYB_related family protein