PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95906.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB
Protein Properties Length: 296aa    MW: 33501.9 Da    PI: 8.1544
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.8e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+ Ed++l+ ++k +G g W++ +++ g++R++k+c++rw++yl
       RWR95906.1 14 RGAWTALEDKILISYIKTHGEGKWRSLPKRAGLKRCGKSCRLRWLNYL 61
                     89********************************************97 PP
2Myb_DNA-binding521.6e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ + +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ 
       RWR95906.1  67 RGNISDDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 111
                      78999*****************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGRSACCSKE GLNRGAWTAL EDKILISYIK THGEGKWRSL PKRAGLKRCG KSCRLRWLNY  60
LRPDIKRGNI SDDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT TLGKKVRAES  120
SGSPWRRPKT NSKAKQPMSE PPVVKVPPGP EPNIIQTKAH RCSNGFIHHQ GHTPCPDTDQ  180
IVDLKTQNKS IMSQVLQVPP STPCQDDSLK HMILDFEMED LCLTYPQDSN ILQVNHRGIQ  240
ANDNVIRGDN DNINLSASSD GSLLFNDAIL EDWTAENNCL EPYDFRSLAS YLNFED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16720.14e-61MYB family protein