PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR95904.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 232aa MW: 26487.9 Da PI: 8.322 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.8e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+++++ +G ++W ++++ g++R +k+c++rw++yl RWR95904.1 15 KGAWTAEEDEKLIKCIEIYGERRWQSVPSQAGLNRNGKSCRLRWLNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.8 | 4.5e-17 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Iar+++ gRt++++k++w+++l RWR95904.1 68 RGNISDQEEDLIIRLHKLLGNR-WSLIARRLP-GRTDNEIKNYWNSHL 113 78999*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MAPTKEKSAK VAVNKGAWTA EEDEKLIKCI EIYGERRWQS VPSQAGLNRN GKSCRLRWLN 60 YLRPNIKRGN ISDQEEDLII RLHKLLGNRW SLIARRLPGR TDNEIKNYWN SHLSKKINKP 120 NEKKGPKSHK SRKSLQGNGG LSENGPSIKE DEHQRDEFDV EEFFDFSRDG VVGGLFGSSV 180 EQPMERFDGF VSKKGSFSME WVRDFLDVEE VLCGFPCIEG IGEEINNPVP PV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 1e-50 | MYB family protein |