PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95864.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 296aa    MW: 32971 Da    PI: 6.3174
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.1e-16112161255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 +ykGVr +k +g+Wv+eIr p     +   r++lg+++t e+Aa+a +aa  +l+g
  RWR95864.1 112 RYKGVRKRK-WGKWVSEIRLP-----HsrERIWLGSYDTSEKAARAFDAAVFCLRG 161
                 69****999.**********7.....335*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MRNRKTHVLK IKAASSALCH VTIRHQPPHP PATCLDPSSH THLKTRLLVS PRNIERVYNT  60
QCRHLLSPTS ELNRDLITIG LQSTWTTSQP SITIEKMVKS NADKVATDTE LRYKGVRKRK  120
WGKWVSEIRL PHSRERIWLG SYDTSEKAAR AFDAAVFCLR GRKAKFNFPD NPPEIAGGAS  180
LNPAEIQVVA AKFANEAAQS EKEQMPDLPE SSSPSSEWSS PSPGSEADLA GESELMMDWS  240
FLESLGAPRF GESAAGFEDF PVGYDEFSGD VFSELLQDVE SGFDFSTQEN SLLWSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114120KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-47ERF family protein