PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR95310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NF-YB | ||||||||
Protein Properties | Length: 211aa MW: 23371.7 Da PI: 7.4062 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 150.3 | 3.7e-47 | 33 | 116 | 2 | 85 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 +eqdr+lPianv+rimk++lP nak+sk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal+tlGf+dy+e+lk RWR95310.1 33 KEQDRLLPIANVGRIMKQILPPNAKVSKEAKETMQECVSEFISFVTGEASDKCRKEKRKTVNGDDICWALGTLGFDDYAETLKR 116 89******************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MVNNIGSSPD SESHSYKVGE ATNSGTSGDG CIKEQDRLLP IANVGRIMKQ ILPPNAKVSK 60 EAKETMQECV SEFISFVTGE ASDKCRKEKR KTVNGDDICW ALGTLGFDDY AETLKRCDSI 120 ALHLGNGNHA CKLIDIAQFV GEWQFESCIG PQIKEYPAMV RVVRRGKGFL EAIFGAGCHM 180 GGHLLGQHEI RWYGKEKSYG FLMDSKGMMR W |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 117 | ETLKRC |
2 | 113 | 117 | TLKRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 5e-52 | NF-YB family protein |