PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR95245.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | WRKY | ||||||||
Protein Properties | Length: 242aa MW: 27369.4 Da PI: 6.1765 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 107.4 | 7.1e-34 | 129 | 186 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCts+ C vkk+vers++dp++v++tYeg+H+h+ RWR95245.1 129 EDGYRWRKYGQKAVKDSPFPRSYYRCTSHMCGVKKRVERSSDDPTIVVTTYEGQHKHP 186 8********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MESFYDEFQP TSAFTSIFDL SGDMGVPGGS SLGFMDLLEL EDFGPSMLDL PPPSTVGMTT 60 ASPTLPPGTP NSSSSNEVGN EYDIKVEVEE EENKSKKELK SEKKKTKKQK REREPQFAFI 120 TKSQVDHLED GYRWRKYGQK AVKDSPFPRS YYRCTSHMCG VKKRVERSSD DPTIVVTTYE 180 GQHKHPNPTV PQPPIPLNSD EVLAGFSSTV DMATLSNHYY HHHHHQQQQP QYIFSSPPSF 240 NF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18170.1 | 5e-40 | WRKY family protein |