PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94966.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 461aa MW: 51249.7 Da PI: 6.8374

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94966.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.5	2.1e-17	159	208	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr+l+P++ ++K +Ka+ L +++eYI+ Lq RWR94966.1 159 RSKHSATEQRRRSKINDRFQMLRQLIPHS----DQKRDKASFLLEVIEYIQVLQ 208 889***********************9....9***************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MDHNSTFAYA VVKPERNAYT MVQETNVDRI RETGKTNSNC SSYNGGGFTL WDESAVKLRS 60 VGKDGVGESQ LTRETSEKSA QFPPFISGCT GFGSMASSKY QGQRSERGFM EIMKAVKGFQ 120 EDEEDDEEDY VKKESSSQQG DVGVKGGAKG NEQRANTPRS KHSATEQRRR SKINDRFQML 180 RQLIPHSDQK RDKASFLLEV IEYIQVLQEK VLKYEAAFPG WNQDTMKFMP WKHNHGLGES 240 IADHSRATKN GADPELMFVH KFNDNNVAVT PSMLVNTQNP VDSTNMSMGT HKEVDRHVDL 300 ANKASSLPIP LQQSVYTSSA GRNSGIAQRQ HGLISDAENM VSQCKHHLWQ RSCPADNGML 360 NEHEELAIEG GTIRVSNVYS QGFLNSLAQA LQSLGIDLSQ ASVSVQIDLG KRAISRPPST 420 TSSSKDHEEP SSCNWAMEHS RVASSGEDSD QVHKRLRTDN R

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MDHNSTFAYA VVKPERNAYT MVQETNVDRI RETGKTNSNC SSYNGGGFTL WDESAVKLRS  60
VGKDGVGESQ LTRETSEKSA QFPPFISGCT GFGSMASSKY QGQRSERGFM EIMKAVKGFQ  120
EDEEDDEEDY VKKESSSQQG DVGVKGGAKG NEQRANTPRS KHSATEQRRR SKINDRFQML  180
RQLIPHSDQK RDKASFLLEV IEYIQVLQEK VLKYEAAFPG WNQDTMKFMP WKHNHGLGES  240
IADHSRATKN GADPELMFVH KFNDNNVAVT PSMLVNTQNP VDSTNMSMGT HKEVDRHVDL  300
ANKASSLPIP LQQSVYTSSA GRNSGIAQRQ HGLISDAENM VSQCKHHLWQ RSCPADNGML  360
NEHEELAIEG GTIRVSNVYS QGFLNSLAQA LQSLGIDLSQ ASVSVQIDLG KRAISRPPST  420
TSSSKDHEEP SSCNWAMEHS RVASSGEDSD QVHKRLRTDN R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	2e-72	bHLH family protein